Package: SubVis 2.0.2

SubVis: Visual Exploration of Protein Alignments Resulting from Multiple Substitution Matrices

Substitution matrices are important parameters in protein alignment algorithms. These matrices represent the likelihood that an amino acid will be substituted for another during mutation. This tool allows users to apply predefined and custom matrices and then explore the resulting alignments with interactive visualizations. 'SubVis' requires the availability of a web browser.

Authors:Scott Barlowe <[email protected]>

SubVis_2.0.2.tar.gz
SubVis_2.0.2.zip(r-4.5)SubVis_2.0.2.zip(r-4.4)SubVis_2.0.2.zip(r-4.3)
SubVis_2.0.2.tgz(r-4.4-any)SubVis_2.0.2.tgz(r-4.3-any)
SubVis_2.0.2.tar.gz(r-4.5-noble)SubVis_2.0.2.tar.gz(r-4.4-noble)
SubVis_2.0.2.tgz(r-4.4-emscripten)SubVis_2.0.2.tgz(r-4.3-emscripten)
SubVis.pdf |SubVis.html✨
SubVis/json (API)

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1 exports 0.36 score 44 dependencies 1 mentions 318 downloads

Last updated 7 years agofrom:f822cbf166. Checks:OK: 5 WARNING: 2. Indexed: yes.

Exports:startSubVis

Dependencies:askpassbase64encBiocGenericsBiostringsbslibcachemclicommonmarkcrayoncurldigestfastmapfontawesomefsGenomeInfoDbGenomeInfoDbDatagluehtmltoolshttpuvhttrIRangesjquerylibjsonlitelaterlifecyclemagrittrmemoisemimeopensslpromisesR6rappdirsRcpprlangS4VectorssassshinysourcetoolssysUCSC.utilswithrxtableXVectorzlibbioc